Index

A

accuracy (fredtools.braggPeak property) addExpMarginToMask() (in module fredtools) addGaussMarginToMask() (in module fredtools)

addMarginToMask() (in module fredtools) anonymizeDicoms() (in module fredtools) arr() (in module fredtools)

B

bortCut (fredtools.braggPeak property) bortfeldFit (fredtools.braggPeak property) bortfeldFitParam (fredtools.braggPeak property)

bp (fredtools.braggPeak property) bpBort (fredtools.braggPeak property) bpInterp (fredtools.braggPeak property) braggPeak (class in fredtools)

C

calcContours() (in module fredtools.ft_optimisation) calcGammaIndex() (in module fredtools) calcRaysVectors() (in module fredtools) calcWETfromWER() (in module fredtools.ft_optimisation) checkFREDVersion() (in module fredtools) compareImgFoR() (in module fredtools) convertCTtoWER() (in module fredtools.ft_optimisation)

convertMHDtoDoubleFiles() (in module fredtools) convertMHDtoSingleFile() (in module fredtools) convertRayTargetToIsoPlane() (in module fredtools.ft_optimisation) createConeMask() (in module fredtools) createCylinderMask() (in module fredtools) createEllipseMask() (in module fredtools) cropImgToMask() (in module fredtools)

D

displayImageInfo() (in module fredtools)

displayInfo (fredtools.braggPeak property)

F

fitLandau() (in module fredtools) fitLandauGauss() (in module fredtools) fitSpotProfile() (in module fredtools)

fitVavilov() (in module fredtools) floatingToBinaryMask() (in module fredtools) fwhm2sigma() (in module fredtools)

G

generateIsoLayers() (in module fredtools.ft_optimisation) getCPUNo() (in module fredtools) getCT() (in module fredtools) getCumSum() (in module fredtools) getDBort() (fredtools.braggPeak method) getDFOBort() (fredtools.braggPeak method) getDFOInterp() (fredtools.braggPeak method) getDicomTypeName() (in module fredtools) getDInterp() (fredtools.braggPeak method) getDVHMask() (in module fredtools) getDVHStruct() (in module fredtools) getExtent() (in module fredtools) getExternalName() (in module fredtools) getExtMpl() (in module fredtools) getFREDVersion() (in module fredtools) getFREDVersions() (in module fredtools) getGIcmap() (in module fredtools) getGIstat() (in module fredtools) getHistogram() (in module fredtools) getImageCenter() (in module fredtools) getImgBEV() (in module fredtools) getInmFREDBaseImg() (in module fredtools) getInmFREDInfo() (in module fredtools) getInmFREDPoint() (in module fredtools) getInmFREDPointSparse() (in module fredtools) getInmFREDSumImage() (in module fredtools)

getInteg() (in module fredtools) getLineFromFile() (in module fredtools) getMassCenter() (in module fredtools) getMaxPosition() (in module fredtools) getMinPosition() (in module fredtools) getPET() (in module fredtools) getPoint() (in module fredtools) getProfile() (in module fredtools) getRBort() (fredtools.braggPeak method) getRD() (in module fredtools) getRDFileNameForFieldNumber() (in module fredtools) getRInterp() (fredtools.braggPeak method) getRNFields() (in module fredtools) getRNInfo() (in module fredtools) getRNIsocenter() (in module fredtools) getRNMachineName() (in module fredtools) getRNSpots() (in module fredtools) getRSInfo() (in module fredtools) getSize() (in module fredtools) getSlice() (in module fredtools) getStatistics() (in module fredtools) getVoxelCentres() (in module fredtools) getVoxelEdges() (in module fredtools) getVoxelPhysicalPoints() (in module fredtools) getWBort() (fredtools.braggPeak method) getWInterp() (fredtools.braggPeak method)

I

imgDivide() (in module fredtools) interpolateBeamModel() (in module fredtools)

interpolation (fredtools.braggPeak property) isPointInside() (in module fredtools)

M

mapStructToImg() (in module fredtools)

mergePDF() (in module fredtools)

O

offset (fredtools.braggPeak property) optimiseBeamPositions() (in module fredtools.ft_optimisation)

optimiseBeamPositionsHexagonal() (in module fredtools.ft_optimisation) optimiseBeamPositionsRegular() (in module fredtools.ft_optimisation) overwriteCTPhysicalProperties() (in module fredtools)

P

pdfLandau() (in module fredtools) pdfLandauGauss() (in module fredtools)

pdfVavilov() (in module fredtools) plot (fredtools.braggPeak property) pos() (in module fredtools)

R

readBeamModel() (in module fredtools) readFREDStat() (in module fredtools) readGATE_HITSActor() (in module fredtools) readGATE_PSActor() (in module fredtools) readGATEStat() (in module fredtools)

readMap3D() (in module fredtools) readMHD() (in module fredtools) readOPG() (in module fredtools) resampleImg() (in module fredtools) runFRED() (in module fredtools)

S

setFieldsFolderStruct() (in module fredtools) setIdentityDirection() (in module fredtools) setValueMask() (in module fredtools) showSlice() (in module fredtools) showSlices (class in fredtools)

sigma2fwhm() (in module fredtools) sortDicoms() (in module fredtools) splineOrder (fredtools.braggPeak property) sumImg() (in module fredtools) sumVectorImg() (in module fredtools)

T

transformContinuousIndexToPhysicalPoint() (in module fredtools) transformIndexToPhysicalPoint() (in module fredtools)

transformPhysicalPointToContinuousIndex() (in module fredtools) transformPhysicalPointToIndex() (in module fredtools)

V

vec() (in module fredtools)

W

writeBeamModel() (in module fredtools)

writeMap3D() (in module fredtools) writeMHD() (in module fredtools)